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AT5G15180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01190.1); Has 4357 Blast hits to 4326 proteins in 247 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 78; Plants - 4238; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G15180-MONOMEREC:1.11.1.7eggNOG:ENOG410IKN0eggNOG:ENOG410YDBA
EMBL:AL353993EMBL:AY072172EMBL:AY142591EMBL:CP002688
EMBL:Z18075EnsemblPlants:AT5G15180EnsemblPlants:AT5G15180.1entrez:831370
ExpressionAtlas:Q9LXG3GeneID:831370Genevisible:Q9LXG3GO:GO:0004601
GO:GO:0005576GO:GO:0006979GO:GO:0009505GO:GO:0009664
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0098869
Gramene:AT5G15180.1hmmpanther:PTHR31235hmmpanther:PTHR31235:SF17HOGENOM:HOG000237556
InParanoid:Q9LXG3InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255
InterPro:IPR019793InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT5G15180
KO:K00430ncoils:CoilOMA:PFNNISSPaxDb:Q9LXG3
PeroxiBase:222Pfam:PF00141Pfam:Q9LXG3Pfscan:PS50873
PhylomeDB:Q9LXG3PIR:T49953PRIDE:Q9LXG3PRINTS:PR00458
PRINTS:PR00461PRO:PR:Q9LXG3PROSITE:PS00435PROSITE:PS00436
PROSITE:PS50873ProteinModelPortal:Q9LXG3Proteomes:UP000006548RefSeq:NP_197022.1
scanprosite:PS00435scanprosite:PS00436SMR:Q9LXG3STRING:3702.AT5G15180.1
SUPFAM:SSF48113TAIR:AT5G15180TMHMM:TMhelixUniGene:At.43105
UniProt:Q0WR91UniProt:Q9LXG3
Coordinates (TAIR10) chr5:+:4930561..4932211
Molecular Weight (calculated) 36226.90 Da
IEP (calculated) 8.54
GRAVY (calculated) -0.10
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALKMTISC FLFLQVIYCL LSSFAPTNVQ GLKVGFYDKA CPKAELIVKK SVFEAVKNDR TIAAPLLRMF FHDCFVRGCE GSVLLELKNK KDEKNSIPNL
101: TLRGFEIIDN VKAALEKECP GIVSCSDVLA LVARDAMVAL NGPSWEVETG RRDGLVTNIT EALLNLPSPF NNISSLITQF QSKGLDKKDL VVLSGGHTIG
201: NGHCPQITNR LYNFTGKGDS DPNLDTEYAV KLRGKCKPTD TTTALEMDPG SFKTFDESYF KLVSQRRGLF QSDAALLDNQ ETKSYVLKSL NSDGSTFFKD
301: FGVSMVKMGR IGVLTGQVGE VRKKCRMVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)