AT4G13030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.714 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 75 Blast hits to 75 proteins in 36 species: Archae - 0; Bacteria - 37; Metazoa - 10; Fungi - 2; Plants - 25; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7607400..7609656 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54305.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.01 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||
| Length | 481 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGDTFKDDV VDEESSRSSS SSPCSCCFSD DLGFKDDVSE ENFTNFSNHV TDLRRREKAY QEILQSHDLL LRTSKRKLRQ ARNEILSYTP GSWSDVKLSD 101: YNIPKTTSIM LVGPKGAGKS SLVNKITRVI EDDAFLLDRA QESFGTPSKG GTYFVQEYMI SRGGSASFCL YDTRGLSRIS SSDNTSMIEQ WMTRGVLHGE 201: PVIWASDSSD LKDRLIRDGG TGYERRKVNS IIFVVNAVEI LKSMECETSY ASMITTAFNS PILLFKDDKP AVVMTHGDML SREERARVRV FLGELLGIPP 301: HKQIFDIPES RDTATAITIC NLLCYSLQHA DKNFVFLPKK NFTISKVGGG GLTKWISLLD IISIALVLFM ALASIWFVTH NPVSGQKLAN ETQQKLLKFP 401: SPWLNNLTHK AKPMRRFGPK RIIKGPNLAC VQHPKSEFVP ESEPISIDLH IARRLWFNEE QVAEAEPSFD WRTTRRLWYV E |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)