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AT4G31240.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.949
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase C-like zinc finger protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase C-like zinc finger protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT1G60420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G31240-MONOMERBioCyc:ARA:GQT-1277-MONOMEREC:1.8.1.8eggNOG:ENOG410ZIWC
eggNOG:KOG2501EMBL:AL021633EMBL:AL161578EMBL:AY063945
EMBL:AY096637EMBL:CP002687EnsemblPlants:AT4G31240EnsemblPlants:AT4G31240.1
EnsemblPlants:AT4G31240.2entrez:829251Gene3D:3.40.30.10GeneID:829251
Genevisible:Q8VZQ0GO:GO:0047134Gramene:AT4G31240.1Gramene:AT4G31240.2
hmmpanther:PTHR13871hmmpanther:PTHR13871:SF38HOGENOM:HOG000240129InParanoid:Q8VZQ0
InterPro:IPR004146InterPro:IPR012336KEGG:ath:AT4G31240KO:K17609
OMA:CDECQQKPaxDb:Q8VZQ0Pfam:PF03107Pfam:PF07649
Pfam:PF13905Pfam:Q8VZQ0Pfscan:PS51352PhylomeDB:Q8VZQ0
PIR:T04491PRIDE:Q8VZQ0PRO:PR:Q8VZQ0PROSITE:PS51352
ProteinModelPortal:Q8VZQ0Proteomes:UP000006548RefSeq:NP_567869.1RefSeq:NP_974651.1
SMR:Q8VZQ0STRING:3702.AT4G31240.1SUPFAM:SSF52833SUPFAM:SSF57889
TAIR:AT4G31240UniGene:At.27135UniProt:Q8VZQ0
Coordinates (TAIR10) chr4:-:15176637..15177986
Molecular Weight (calculated) 44965.00 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.19
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)