AT1G67600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.713 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1); Has 1114 Blast hits to 1114 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25336701..25337455 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 17600.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.92 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.43 | ||||||||||||||||||||||||||||||||
| Length | 163 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEESVASSSS HYISIFTNYP LISAVLAFTI AQFIKFFTSW YKERRWDLKR LVGSGGMPSS HSATVTALAL AVGLQEGFGG SHFAIALVLT TIVMYDATGV 101: RLHAGRQAEV LNQIVYELPA EHPLAETRPL RELLGHTPPQ VIAGGMLGIS TAVVGYLVIL LAK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)