AT2G37890.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.939 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Mitochondrial substrate carrier family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G53940.1); Has 31162 Blast hits to 14569 proteins in 465 species: Archae - 0; Bacteria - 2; Metazoa - 13469; Fungi - 9587; Plants - 4863; Viruses - 0; Other Eukaryotes - 3241 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:15862017..15863849 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36595.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.11 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 337 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNVDARVGVA VDGAQSALNT ATTVHSSVVM TQIKPQAKLG TFQNLLAGGI AGAISKTCTA PLARLTILFQ LQGMQSEGAV LSRPNLRREA SRIINEEGYR 101: AFWKGNLVTV VHRIPYTAVN FYAYEKYNLF FNSNPVVQSF IGNTSGNPIV HFVSGGLAGI TAATATYPLD LVRTRLAAQR NAIYYQGIEH TFRTICREEG 201: ILGLYKGLGA TLLGVGPSLA INFAAYESMK LFWHSHRPND SDLVVSLVSG GLAGAVSSTA TYPLDLVRRR MQVEGAGGRA RVYNTGLFGT FKHIFKSEGF 301: KGIYRGILPE YYKVVPGVGI VFMTYDALRR LLTSLPD |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)