AT1G15110.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.775 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : phosphatidyl serine synthase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 329 Blast hits to 325 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:5199594..5201908 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49520.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.13 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.18 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 425 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPNGYRKER RKEQHLGRMN GGGGDVETDL DPWTAWAYKP RTISLLLIGA CFLIWASGAL DPDSTTSDDL VTSVKRGVWA MIAVFLAYSL LQAPSTVLIR 101: PHPAIWRLVH GMAVIYLVAL TFLLFQRRDD ARQFMKFLHP DLGIELPEKS YGADCRIYVP DHPTNRFKNL YDTVFDEFFL AHIFGWWGKA ILIRNQPLLW 201: VLSIGFELLE VTFRHMLPNF NECWWDSIVL DILICNWFGI WAGMYTVRYF DGKTYEWVGI SRQPNIIGKV KRTLGQFTPA HWDKDEWHPL QGPWRFIQVL 301: TLCIIFLTVE LNTFFLKFSL WIPPRNPVIL YRLILWWLIA IPTTREYNSY LQDRKPVKKV GAFCWLSLGI CIVELLICIK FGSGLYPTEM PLWVVTLWGS 401: VGLGLVAFLL SWTWKIQKIL AQKRR |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)