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AT3G26690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.382
nucleus 0.281
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 13
Curator
Summary (TAIR10)
Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates.
Computational
Description (TAIR10)
nudix hydrolase homolog 13 (NUDX13); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1216 Blast hits to 1215 proteins in 350 species: Archae - 0; Bacteria - 513; Metazoa - 242; Fungi - 111; Plants - 235; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26690-MONOMERBioCyc:ARA:GQT-1102-MONOMERBRENDA:3.6.1.B13EC:3.6.1.-
eggNOG:COG0494eggNOG:KOG2839EMBL:AB026648EMBL:BT021980
EMBL:BT024767EMBL:CP002686EnsemblPlants:AT3G26690EnsemblPlants:AT3G26690.1
EnsemblPlants:AT3G26690.2entrez:822281Gene3D:3.90.79.10GeneID:822281
Genevisible:Q52K88GO:GO:0005739GO:GO:0016787GO:GO:0034432
GO:GO:0046872Gramene:AT3G26690.1Gramene:AT3G26690.2hmmpanther:PTHR12629
hmmpanther:PTHR12629:SF11HOGENOM:HOG000165198InterPro:IPR000086InterPro:IPR015797
InterPro:IPR020084KEGG:ath:AT3G26690OMA:EADCCLGPaxDb:Q52K88
Pfam:PF00293Pfam:Q52K88Pfscan:PS51462PhylomeDB:Q52K88
PRIDE:Q52K88PRO:PR:Q52K88PROSITE:PS00893PROSITE:PS51462
ProteinModelPortal:Q52K88Proteomes:UP000006548RefSeq:NP_189303.1RefSeq:NP_850636.1
scanprosite:PS00893SMR:Q52K88STRING:3702.AT3G26690.1SUPFAM:SSF55811
TAIR:AT3G26690tair10-symbols:ATNUDT13tair10-symbols:ATNUDX13tair10-symbols:NUDX13
UniGene:At.21140UniGene:At.43974UniProt:Q52K88
Coordinates (TAIR10) chr3:-:9804418..9805398
Molecular Weight (calculated) 23188.20 Da
IEP (calculated) 4.38
GRAVY (calculated) -0.60
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNLSARTGR DHQRYDNNFR LVSGCIPYRL VKDEEEDSTS VDFENKLQVL MISSPNRHDL VFPKGGWEDD ETVLEAASRE AMEEAGVKGI LREDPLGVWE
101: FRSKSSSVEA DCCLGGGCKG YMFALEVKEE LAIWPEQDDR ERRWLNVKEA LELCRYEWMQ SALEEFLRVM AEEGSTKEDS LAISSISNRG ERQIDPRYCF
201: VV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)