AT5G51770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 88935 Blast hits to 72359 proteins in 3004 species: Archae - 64; Bacteria - 5807; Metazoa - 25667; Fungi - 4967; Plants - 43770; Viruses - 185; Other Eukaryotes - 8475 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21031030..21032994 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73334.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.89 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 654 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSRTLPSPA PVNSPFSSSV TPHHETTTTR IFPPLAAVGF SLFITLSICF CKFNRKRRSP AAVASSSTPP QKQPLHEFSY SSLRKATASF SPENRLGQGG 101: FGSVFRGTLS PSSGGGNVAV KVMDSGSLQG EREFQNELFF AGKLDSPHVV SVIGFSRRRR SRLILVYELM DIGNLQDALL HRRSPELMIW NRRFLVAIDI 201: AKGIEHLHSL NPCVIHGDLK PSNVLLDRFF SAKISDFGLA RLKSEHVEVK VVSESDVVED YGSVVEEVES VVTNTTGCDE SNFGFTDQSP VPLSSPEMVE 301: QVPMTSPETV VSVSPEMGEK GSVLEVGNVV RSKDWWWKQE GNVGRGKGKE YVMQWIGSEV KEERQSSDWI AETAEGGKKV EKKKSSKRLE WWLSLDEEKE 401: KGKKKKRRMV REWWKDEYRK ELAKRMKKKK KKKTLESEFY SDDVSGSVDQ RRHGDGEVYR KKRRGVSSNS IGSSIDWWLD GLSGEQWRAR RRNSQDSVKS 501: CGVSSTPSMR GTMCYVAPEC CGNNIDDVSE KSDVYSYGVL LLVLVSGRRP LEVTGPASEI MLRANLMSWA RKLARRGRLG DLVDEKLQLL DQEQAVLCIK 601: VALQCLQKSP VSRPSMKDVL EMLTGAISPP DLPTEFSPSP QTRFPFKARR KQNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)