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AT2G05320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.723
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-1,2-N-acetylglucosaminyltransferase II
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta-1,2-N-acetylglucosaminyltransferase II; FUNCTIONS IN: acetylglucosaminyltransferase activity, alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity; INVOLVED IN: oligosaccharide biosynthetic process; LOCATED IN: Golgi stack, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyltransferase II (InterPro:IPR007754); Has 211 Blast hits to 180 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G05320-MONOMERCAZy:GT16EC:2.4.1.143eggNOG:ENOG410XPYF
eggNOG:KOG2791EMBL:AJ249274EMBL:CP002685EMBL:KJ138918
EnsemblPlants:AT2G05320EnsemblPlants:AT2G05320.1entrez:815080Gene3D:3.90.550.10
GeneID:815080GO:GO:0005795GO:GO:0008455GO:GO:0009312
GO:GO:0016021Gramene:AT2G05320.1hmmpanther:PTHR12871hmmpanther:PTHR12871:SF0
HOGENOM:HOG000239578InterPro:IPR007754InterPro:IPR029044KEGG:00510+2.4.1.143
KEGG:00513+2.4.1.143KEGG:ath:AT2G05320KO:K00736OMA:CTFDEYN
PANTHER:PTHR12871Pfam:PF05060PhylomeDB:Q9FT88Proteomes:UP000006548
Reactome:R-ATH-975578RefSeq:NP_178601.2STRING:3702.AT2G05320.1SUPFAM:SSF53448
SwissPalm:Q9FT88TAIR:AT2G05320TMHMM:TMhelixUniGene:At.10148
unipathway:UPA00378UniProt:Q9FT88
Coordinates (TAIR10) chr2:+:1936016..1937308
Molecular Weight (calculated) 48949.20 Da
IEP (calculated) 7.96
GRAVY (calculated) -0.42
Length 430 amino acids
Sequence (TAIR10)
(BLAST)
001: MANLWKKQRL RDTGLCRLGI LFAVTLSIVL MLVSVPRTAL NGSSIDDDLD GLDKDLEAKL NASLLSVARG NRMSLRLHRR NHFSPRNTDL FPDLAKDRVV
101: IVLYVHNRAQ YFRVTVESLS KVKGISETLL IVSHDGYFEE MNRIVESIKF CQVKQIFSPY SPHIYRTSFP GVTLNDCKNK GDEAKGHCEG NPDQYGNHRS
201: PKIVSLKHHW WWMMNTVWDG LEETKGHEGH ILFIEEDHFL FPNAYRNIQT LTRLKPAKCP DCFAANLAPS DVKSRGEGLE SLVAERMGNV GYSFNRSVWE
301: NIHQKAREFC FFDDYNWDIT MWATVFPSFG SPVYTLRGPR TSAVHFGKCG LHQGRGDEGD CIDNGVVNIE VKETDKVVNI KEGWGVRVYK HQAGYKAGFE
401: GWGGWGDDRD RHLCLDFATM YRYSSSSASP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)