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AT1G13600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine-zipper 58
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 58 (bZIP58); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 48 (TAIR:AT2G04038.1); Has 2046 Blast hits to 2038 proteins in 142 species: Archae - 0; Bacteria - 6; Metazoa - 51; Fungi - 55; Plants - 1834; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWJIeggNOG:ENOG41104VFEMBL:AB493455EMBL:AC027134
EMBL:AC027656EMBL:AF332430EMBL:CP002684EnsemblPlants:AT1G13600
EnsemblPlants:AT1G13600.1entrez:837921GeneID:837921GO:GO:0003700
GO:GO:0043565GO:GO:0046982Gramene:AT1G13600.1hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF110HOGENOM:HOG000238858IntAct:Q9LMY8InterPro:IPR004827
KEGG:ath:AT1G13600ncoils:CoilOMA:MVIDERKPfam:PF00170
Pfscan:PS50217PhylomeDB:Q9LMY8PIR:A86269PROSITE:PS00036
PROSITE:PS50217Proteomes:UP000006548RefSeq:NP_172817.2scanprosite:PS00036
SMART:SM00338SMR:Q9LMY8STRING:3702.AT1G13600.1SUPFAM:SSF57959
TAIR:AT1G13600tair10-symbols:AtbZIP58tair10-symbols:bZIP58UniGene:At.20939
UniProt:Q9LMY8
Coordinates (TAIR10) chr1:-:4650787..4651377
Molecular Weight (calculated) 22874.30 Da
IEP (calculated) 5.60
GRAVY (calculated) -1.12
Length 196 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)