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AT4G31730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutamine dumper 1
Curator
Summary (TAIR10)
Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretion
Computational
Description (TAIR10)
glutamine dumper 1 (GDU1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine secretion, regulation of amino acid export; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glutamine dumper 4 (TAIR:AT2G24762.1); Has 157 Blast hits to 157 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:14587eggNOG:ENOG410J10AeggNOG:ENOG410YP3QEMBL:AK227758
EMBL:AL031004EMBL:AL161579EMBL:BT011573EMBL:BT012238
EMBL:CP002687EnsemblPlants:AT4G31730EnsemblPlants:AT4G31730.1entrez:829301
GeneID:829301Genevisible:O81775GO:GO:0005634GO:GO:0005886
GO:GO:0006521GO:GO:0010585GO:GO:0016020GO:GO:0016021
GO:GO:0080143Gramene:AT4G31730.1hmmpanther:PTHR33228hmmpanther:PTHR33228:SF5
HOGENOM:HOG000238859InParanoid:O81775IntAct:O81775KEGG:ath:AT4G31730
ncoils:CoilOMA:PAMKKCTPaxDb:O81775Pfam:O81775
PhylomeDB:O81775PIR:T05097PRIDE:O81775PRO:PR:O81775
Proteomes:UP000006548RefSeq:NP_194901.1STRING:3702.AT4G31730.1TAIR:AT4G31730
tair10-symbols:GDU1TCDB:9.B.60.1.1TMHMM:TMhelixUniGene:At.31719
UniProt:O81775
Coordinates (TAIR10) chr4:+:15361207..15361683
Molecular Weight (calculated) 17255.30 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.51
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG
101: EDLPRYLATP AMKKCTCGGH EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)