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AT4G25760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.940
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutamine dumper 2
Curator
Summary (TAIR10)
Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).
Computational
Description (TAIR10)
glutamine dumper 2 (GDU2); BEST Arabidopsis thaliana protein match is: glutamine dumper 3 (TAIR:AT5G57685.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:13968eggNOG:ENOG410JXQ2eggNOG:ENOG41103SKEMBL:AL049480
EMBL:AL161563EMBL:AY086421EMBL:BX828970EMBL:CP002687
EnsemblPlants:AT4G25760EnsemblPlants:AT4G25760.1entrez:828681GeneID:828681
Genevisible:Q9SW07GO:GO:0006865GO:GO:0016021GO:GO:0080143
Gramene:AT4G25760.1hmmpanther:PTHR33228hmmpanther:PTHR33228:SF5HOGENOM:HOG000238859
InParanoid:Q9SW07IntAct:Q9SW07KEGG:ath:AT4G25760OMA:PDNDTNK
PaxDb:Q9SW07Pfam:Q9SW07PIR:T04230PRO:PR:Q9SW07
ProteinModelPortal:Q9SW07Proteomes:UP000006548RefSeq:NP_567728.1STRING:3702.AT4G25760.1
TAIR:AT4G25760tair10-symbols:ATGDU2tair10-symbols:GDU2TMHMM:TMhelix
UniGene:At.32236UniProt:Q9SW07
Coordinates (TAIR10) chr4:+:13116149..13116538
Molecular Weight (calculated) 14223.80 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.44
Length 129 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTMEGRQYN YQDSINASSS MVVPHSPWHS PVPYLFGGLA AMLALICVAL LILACSYWRL SGSAERDLEA GDDAKPDNDT NKTKHTEMPE KFLVIMAGDV
101: RPTYLATPAT RSEQSCTCGD HNEEEGRRG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)