suba logo
AT1G13100.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.903
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 29
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 29 (CYP71B29); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 28 (TAIR:AT1G13090.1); Has 32382 Blast hits to 32119 proteins in 1696 species: Archae - 46; Bacteria - 3118; Metazoa - 11830; Fungi - 6731; Plants - 9528; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13100-MONOMERBioGrid:23107EC:1.14.-.-eggNOG:COG2124
eggNOG:KOG0156EMBL:AC007357EMBL:CP002684EnsemblPlants:AT1G13100
EnsemblPlants:AT1G13100.1entrez:837867Gene3D:1.10.630.10GeneID:837867
Genevisible:Q9SAE4GO:GO:0005506GO:GO:0009506GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
GO:GO:0098542Gramene:AT1G13100.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144
HOGENOM:HOG000218629InParanoid:Q9SAE4InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT1G13100KO:K00517OMA:IHDLECC
PaxDb:Q9SAE4Pfam:PF00067Pfam:Q9SAE4PhylomeDB:Q9SAE4
PIR:B86265PRIDE:Q9SAE4PRINTS:PR00385PRINTS:PR00463
PRO:PR:Q9SAE4PROSITE:PS00086ProteinModelPortal:Q9SAE4Proteomes:UP000006548
RefSeq:NP_172769.1scanprosite:PS00086SMR:Q9SAE4STRING:3702.AT1G13100.1
SUPFAM:SSF48264TAIR:AT1G13100tair10-symbols:CYP71B29UniGene:At.42047
UniProt:Q9SAE4
Coordinates (TAIR10) chr1:+:4463983..4465538
Molecular Weight (calculated) 56008.70 Da
IEP (calculated) 8.14
GRAVY (calculated) -0.03
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIILCFLIL LPLILIFLKK LKHSKWKLPP GPPKLPFIGN LHQLQELPPR NLNHKYGPVI LLRFGFVPLV VISSKEAAEE VLKIHDLECC SRPETAGTRK
101: ISYNFKDIGF APYGEEWKAM RKLSVVELFT AKKHQYFRSI REEENDLLVK KLTELALTRS PVNLKKTLFT LVGSIVCRIG FGFNLHECEF IDENSISDLV
201: DKSEILEMTS MFSDFFPGGI GRFIDWISGQ NKRFDNVFSD LDTFFQNILD YHLKPGRKVA DSSDIIDVVI NMIKKQEKDG DSFKLTTDHL KGMISDIFLA
301: GVSTSASTLI WAITELVRNR KVMKKVQEEI RTTLGDKKER ITEQDLTNLH YFKLVVKEIF RLHPAVPFLL PRETLSHVKI QGYDIPAKTQ IMINVYAIAR
401: DPKLWTNPDE FNPDRFLDSS IDYKGLNFEL LPFGSGRRIC PGMTMGITLV EFALLNLLYF FDWGLPEKEE ADKIITGNGV AVGLVQVLLH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)