AT1G13100.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.903 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 29 (CYP71B29); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 28 (TAIR:AT1G13090.1); Has 32382 Blast hits to 32119 proteins in 1696 species: Archae - 46; Bacteria - 3118; Metazoa - 11830; Fungi - 6731; Plants - 9528; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:4463983..4465538 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56008.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 490 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAIILCFLIL LPLILIFLKK LKHSKWKLPP GPPKLPFIGN LHQLQELPPR NLNHKYGPVI LLRFGFVPLV VISSKEAAEE VLKIHDLECC SRPETAGTRK 101: ISYNFKDIGF APYGEEWKAM RKLSVVELFT AKKHQYFRSI REEENDLLVK KLTELALTRS PVNLKKTLFT LVGSIVCRIG FGFNLHECEF IDENSISDLV 201: DKSEILEMTS MFSDFFPGGI GRFIDWISGQ NKRFDNVFSD LDTFFQNILD YHLKPGRKVA DSSDIIDVVI NMIKKQEKDG DSFKLTTDHL KGMISDIFLA 301: GVSTSASTLI WAITELVRNR KVMKKVQEEI RTTLGDKKER ITEQDLTNLH YFKLVVKEIF RLHPAVPFLL PRETLSHVKI QGYDIPAKTQ IMINVYAIAR 401: DPKLWTNPDE FNPDRFLDSS IDYKGLNFEL LPFGSGRRIC PGMTMGITLV EFALLNLLYF FDWGLPEKEE ADKIITGNGV AVGLVQVLLH |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)