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AT1G13110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26748395 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71 subfamily B, polypeptide 7
Curator
Summary (TAIR10)
member of CYP71B
Computational
Description (TAIR10)
cytochrome P450, family 71 subfamily B, polypeptide 7 (CYP71B7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 23 (TAIR:AT3G26210.1); Has 32794 Blast hits to 32517 proteins in 1680 species: Archae - 46; Bacteria - 3235; Metazoa - 12124; Fungi - 6721; Plants - 9540; Viruses - 0; Other Eukaryotes - 1128 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13110-MONOMERBioGrid:23108EC:1.14.-.-eggNOG:COG2124
eggNOG:KOG0156EMBL:AC007357EMBL:AF462855EMBL:BT005809
EMBL:CP002684EMBL:X97864EnsemblPlants:AT1G13110EnsemblPlants:AT1G13110.1
entrez:837868Gene3D:1.10.630.10GeneID:837868Genevisible:Q96514
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0044550GO:GO:0098542Gramene:AT1G13110.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629InParanoid:Q96514
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT1G13110
OMA:KFEMLVAPaxDb:Q96514Pfam:PF00067Pfam:Q96514
PhylomeDB:Q96514PIR:T52254PRIDE:Q96514PRINTS:PR00385
PRINTS:PR00463PRO:PR:Q96514PROSITE:PS00086ProteinModelPortal:Q96514
Proteomes:UP000006548RefSeq:NP_172770.1scanprosite:PS00086SMR:Q96514
STRING:3702.AT1G13110.1SUPFAM:SSF48264TAIR:AT1G13110tair10-symbols:CYP71B7
TMHMM:TMhelixUniGene:At.23451UniProt:Q96514
Coordinates (TAIR10) chr1:+:4467272..4468857
Molecular Weight (calculated) 57212.30 Da
IEP (calculated) 8.38
GRAVY (calculated) -0.00
Length 504 amino acids
Sequence (TAIR10)
(BLAST)
001: MSILLCFLCL LPVFLVSLSI LSKRLKPSKW KLPPGPKTLP IIGNLHNLTG LPHTCFRNLS QKFGPVMLLH FGFVPVVVIS SKEGAEEALK TQDLECCSRP
101: ETVATRMISY NFKDIGFAPY GEEWKALRKL VVMELLNTKK FQSFRYIREE ENDLLIKKLT ESALKKSPVN LKKTLFTLVA SIVCRLAFGV NIHKCEFVDE
201: DNVADLVNKF EMLVAGVAFT DFFPGVGWLV DRISGQNKTL NNVFSELDTF FQNVLDDHIK PGRQVSENPD VVDVMLDLMK KQEKDGESFK LTTDHLKGII
301: SDIFLAGVNT SAVTLNWAMA ELIRNPRVMK KVQDEIRTTL GDKKQRITEQ DLSQVHYFKL VVKEIFRLHP AAPLLLPRET MSHVKIQGYD IPVKTQMMIN
401: IYSIARDPKL WTNPDEFNPD RFLDSSIDYR GLNFELLPFG SGRRICPGMT LGITTVELGL LNLLYFFDWV VPVGKNVKDI NLEETGSIII SKKTTLELVP
501: LVHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)