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AT1G48260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.982
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : CBL-interacting protein kinase 17
Curator
Summary (TAIR10)
Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17).
Computational
Description (TAIR10)
CBL-interacting protein kinase 17 (CIPK17); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 1 (TAIR:AT3G17510.1); Has 126535 Blast hits to 124591 proteins in 3565 species: Archae - 145; Bacteria - 14911; Metazoa - 46222; Fungi - 12574; Plants - 31282; Viruses - 516; Other Eukaryotes - 20885 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G48260-MONOMERBioGrid:26471EC:2.7.11.1eggNOG:COG0515
eggNOG:KOG0583EMBL:AC007932EMBL:AC023673EMBL:AY036958
EMBL:BT029240EMBL:CP002684EnsemblPlants:AT1G48260EnsemblPlants:AT1G48260.1
entrez:841246GeneID:841246Genevisible:Q94C40GO:GO:0004674
GO:GO:0005524GO:GO:0005737GO:GO:0006468GO:GO:0035556
Gramene:AT1G48260.1hmmpanther:PTHR24343hmmpanther:PTHR24343:SF143HOGENOM:HOG000233016
InParanoid:Q94C40IntAct:Q94C40InterPro:IPR000719InterPro:IPR004041
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR018451
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT1G48260OMA:TIFTEMG
PaxDb:Q94C40Pfam:PF00069Pfam:PF03822Pfam:Q94C40
Pfscan:PS50011Pfscan:PS50816PhylomeDB:Q94C40PIR:E96522
PRIDE:Q94C40PRO:PR:Q94C40PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS50816ProteinModelPortal:Q94C40Proteomes:UP000006548
RefSeq:NP_175260.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q94C40STRING:3702.AT1G48260.1SUPFAM:SSF56112TAIR:AT1G48260
tair10-symbols:CIPK17tair10-symbols:SnRK3.21UniGene:At.15198UniProt:Q94C40
Coordinates (TAIR10) chr1:-:17814226..17817226
Molecular Weight (calculated) 48665.90 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.19
Length 432 amino acids
Sequence (TAIR10)
(BLAST)
001: MVIKGMRVGK YELGRTLGEG NSAKVKFAID TLTGESFAIK IIEKSCITRL NVSFQIKREI RTLKVLKHPN IVRLHEVLAS KTKIYMVLEC VTGGDLFDRI
101: VSKGKLSETQ GRKMFQQLID GVSYCHNKGV FHRDLKLENV LLDAKGHIKI TDFGLSALSQ HYREDGLLHT TCGSPNYVAP EVLANEGYDG AASDIWSCGV
201: ILYVILTGCL PFDDANLAVI CRKIFKGDPP IPRWISLGAK TMIKRMLDPN PVTRVTIAGI KAHDWFKHDY TPSNYDDDDD VYLIQEDVFM MKEYEEEKSP
301: DSPTIINAFQ LIGMSSFLDL SGFFETEKLS ERQIRFTSNS LAKDLLENIE TIFTEMGFCL QKKHAKLKAI KEESTQKRQC GLSVTAEVFE ISPSLNVVEL
401: RKSHGDSSLY KQLYERLLNE LGSSSQVQEL LA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)