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AT1G10920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.957
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NB-ARC domain-containing disease resistance protein
Curator
Summary (TAIR10)
Encodes LOV1, a disease susceptibility gene that, paradoxically, is a member of the NBS-LRR resistance gene family. Conditions susceptibility to the fungus Cochliobolus victoriae and victorin-dependent induction of defense-associated proteins. Saturation mutagenesis identified 59 lov mutations that all display reduced susceptibility to vitorin. Mutations in known defense response pathways do not prevent susceptibility to C. victoriae.
Computational
Description (TAIR10)
LOV1; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response to fungus, response to molecule of fungal origin, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 17113 Blast hits to 15625 proteins in 596 species: Archae - 16; Bacteria - 1275; Metazoa - 1625; Fungi - 139; Plants - 13787; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG4658EMBL:AY074545EMBL:CP002684
EMBL:U95973EnsemblPlants:AT1G10920EnsemblPlants:AT1G10920.1EnsemblPlants:AT1G10920.2
entrez:837635Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:837635
Genevisible:O04093GO:GO:0002238GO:GO:0005886GO:GO:0043531
GO:GO:0050832Gramene:AT1G10920.1Gramene:AT1G10920.2hmmpanther:PTHR23155
hmmpanther:PTHR23155:SF549InParanoid:O04093InterPro:IPR002182InterPro:IPR027417
InterPro:IPR032675iPTMnet:O04093KEGG:ath:AT1G10920OMA:AYHGGEI
PaxDb:O04093Pfam:O04093Pfam:PF00931PhylomeDB:O04093
PIR:A86243PRIDE:O04093ProteinModelPortal:O04093Proteomes:UP000006548
RefSeq:NP_001117266.1RefSeq:NP_172561.2SMR:O04093STRING:3702.AT1G10920.1
SUPFAM:SSF52058SUPFAM:SSF52540TAIR:AT1G10920tair10-symbols:LOV1
UniGene:At.28785UniProt:O04093
Coordinates (TAIR10) chr1:-:3644587..3647004
Molecular Weight (calculated) 83689.70 Da
IEP (calculated) 6.89
GRAVY (calculated) -0.19
Length 727 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSLGIQEII DGASSMSLQE RQREQKEIRQ TFANSSESDL VGVEQSVEAL AGHLVENDNI QVVSISGMGG IGKTTLARQV FHHDMVQRHF DGFAWVFVSQ
101: QFTQKHVWQR IWQELQPQNG DISHMDEHIL QGKLFKLLET GRYLVVLDDV WKEEDWDRIK AVFPRKRGWK MLLTSRNEGV GIHADPKSFG FKTRILTPEE
201: SWKLCEKIVF HRRDETGTLS EVRVDEDMEA MGKEMVTCCG GLPLAVKVLG GLLATKHTVP EWKRVYDNIG PHLAGRSSLD DNLNSIYRVL SLSYENLPMC
301: LKHCFLYLAH FPEYYEIHVK RLFNYLAAEG IITSSDDGTT IQDKGEDYLE ELARRNMITI DKNYMFLRKK HCQMHDMMRE VCLSKAKEEN FLEIFKVSTA
401: TSAINARSLS KSRRLSVHGG NALPSLGQTI NKKVRSLLYF AFEDEFCILE STTPCFRSLP LLRVLDLSRV KFEGGKLPSS IGDLIHLRFL SLHRAWISHL
501: PSSLRNLKLL LYLNLGFNGM VHVPNVLKEM QELRYLQLPM SMHDKTKLEL SDLVNLESLM NFSTKYASVM DLLHMTKLRE LSLFITDGSS DTLSSSLGQL
601: RSLEVLHLYD RQEPRVAYHG GEIVLNCIHL KELELAIHMP RFPDQYLFHP HLSHIYLWCC SMEEDPIPIL ERLLHLKSVI LTFGAFVGRR MVCSKGGFPQ
701: LCFLKLEELE ELEEWIVEEG RCHFFVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)