AT1G09440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G56720.3); Has 119661 Blast hits to 118258 proteins in 4456 species: Archae - 117; Bacteria - 14198; Metazoa - 43932; Fungi - 10102; Plants - 33276; Viruses - 377; Other Eukaryotes - 17659 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3045513..3047393 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52591.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.28 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||
| Length | 466 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGLKIWQAI FITIALIIIV VLSVLSFCLI WKKKSRRSKT LSLPIIQTPV VSKEIKEVRI EHVVSTSSNF DPQDENNNES DKFLLNLEME KNRENGLSSS 101: RSGSGKEGYL CVANRSTSSL YEMATPSPSP LSGLPESHLG WGHWFTLRDL EIATNRFSKE NVIGEGGYGV VYRGELVNGS LVAVKKILNH LGQAEKEFRV 201: EVDAIGHVRH KNLVRLLGYC IEGTNRILVY EYMNNGNLEE WLHGAMKHHG YLTWEARMKV LTGTSKALAY LHEAIEPKVV HRDIKSSNIL IDDRFNAKIS 301: DFGLAKLLGD GKSHVTTRVM GTFGYVAPEY ANTGLLNEKS DVYSFGVLVL EAITGRDPVD YARPANEVNL VEWLKMMVGS KRLEEVIDPN IAVRPATRAL 401: KRVLLTALRC IDPDSEKRPK MSQVVRMLES EEYPVPREER RVRRTQEENS DTDRSRPVSR SQSKRL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)