AT1G56720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:21263630..21265559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54946.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 492 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGDLKSQLS RESHVFGLKV WEVIGIAVAL LIIAILSVLS CCLTSKKKSR RSKTGLPVIQ TPPVVSKEIR EVRVEHVSAS NFAPGEGILL TIQDKNNKDS 101: EKVMVHLDMR KKRSSSGRSG SFHHLEIIDK HSDSAEEVSA SSSLYNIATP SPLSGLPESH LGWGHWFTLR DLETATNRFS KENVIGEGGY GVVYRGELMN 201: GTPVAVKKIL NQLGQAEKEF RVEVDAIGHV RHKNLVRLLG YCIEGTHRIL VYEYVNNGNL EQWLHGAMRQ HGYLTWEARM KVLIGTSKAL AYLHEAIEPK 301: VVHRDIKSSN ILINDEFNAK VSDFGLAKLL GAGKSHVTTR VMGTFGYVAP EYANSGLLNE KSDVYSFGVV LLEAITGRDP VDYGRPAHEV NLVDWLKMMV 401: GTRRSEEVVD PNIEVKPPTR SLKRALLTAL RCVDPDSDKR PKMSQVVRML ESEEYPIPRE DRRRSRTREG SMEINSDTDM STPVSRSQSK RQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)