AT1G09290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 73 Blast hits to 71 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11; Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3001682..3003715 | ||||||||||||||||||||
| Molecular Weight (calculated) | 38499.30 Da | ||||||||||||||||||||
| IEP (calculated) | 6.78 | ||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||
| Length | 348 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAVEEVDDV GRTIEEETVC EKRERGEEAE TLTPWEQHSS IISIPRFDYK APSSLLHHSH SGFLVTCNIK REKSATKEVM SILGKYIGSM HEEKPEVLNS 101: TASKKQKVCA QETEEGGEKT VPLENDALQE TGENPNVEDL KLANEEHNSL MSLVKLTKSG LLLFTFPVEN SPNTTNIVSR VFQSMESGAL KAPIWCHRIF 201: PVQATCGLTE KELRETVSKL VQRFVNDKDN TLSKPVKFAA GYQRRGAEET KGKIRKDASD VLVQCPLLDR IKCFETVAAG VKDIVPDSVV DLKSPELCVL 301: VELLPLSRIS SGSFVAAVSV LPHRLVSTKP KLCIKPLVPE SKHKKGPN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)