AT4G32050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.941 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : neurochondrin family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
neurochondrin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Neurochondrin (InterPro:IPR008709); Has 174 Blast hits to 168 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 7; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15496620..15500717 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 68275.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.62 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.18 | ||||||||||||||||||||||||
| Length | 618 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAAPQEERS PSLDDCLKLL KGERDEQRLA GLLLVTKFCK NDDIVSLNKV YEAVGTHFLD RLFRTGSGSG DGVDNRDVYL QISITVLAAF CRVPEIASSE 101: EMVSRIPLIL EVMSKGITTN MLEDCYELLY LVSTACEAGL MTLINSGGLR VIAPQMSELP DGSHAMEVAI KILQLLVSKL DCGSMTIERF LELSLVIAAV 201: ARQFAVLHNA LKFEALHLLS AVFSSEYSEL LHEPLRSMPD NNWADYMRTG VVAILQNRVA PSEKLHALIL AENMMSILGE KWLLGGVKLP NVDIPADRCL 301: LLVLESSHVE ISVLLNDLAY KKYEAPKDNS TAEDILLKQR YLPIVFSLVE KIIKYISSAG ENEGTLSDEA VFQKVIKILN ETVGAVFEYL RDAKEHGIKK 401: GTDLLASVRV IGSYLAETPV ACKEQVQDLL DYMLSVKGED ESSPFLSTCF LLPMLCQITM NAEGCKLLAY SRGDVAVVEC LIKLIERCGE SVDEDRSIFL 501: ACDTIMNILL KREEISPPEI STFASLLKAL AYWADGSNDH SVVMMAASIC SLIFDFTSED ALQLSRSSLD SLARLVTRSL SSSGQDMSDT ADLLEIIRAG 601: YSRWINRFPT IMKHPVVQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)