AT3G23710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tic22-like family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8534061..8536148 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34577.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 313 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNSNIFPPSK QQNELNNIQQ SFSNLQSQCS NLLLNVSQTL NPLFNANTNN NKPNIFSALN SFRDQAKQAL DSRISRFNSG KAPVWARISD DGGGARAQVT 101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE 201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI 301: PPGFEVSTEQ TQE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)