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AT4G30993.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IUAVeggNOG:ENOG410YKVPEMBL:BT029446EMBL:CP002687EnsemblPlants:AT4G30993EnsemblPlants:AT4G30993.1entrez:829225
ExpressionAtlas:A0JQ76GeneID:829225Gramene:AT4G30993.1hmmpanther:PTHR32254hmmpanther:PTHR32254:SF5InterPro:IPR029052Proteomes:UP000006548
RefSeq:NP_849477.1STRING:3702.AT4G30993.2SUPFAM:SSF56300TAIR:AT4G30993TMHMM:TMhelixUniGene:At.25467UniProt:A0JQ76
Coordinates (TAIR10) chr4:+:15098201..15099422
Molecular Weight (calculated) 23490.40 Da
IEP (calculated) 9.32
GRAVY (calculated) -0.11
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MKQSSWGCTI FIQLSLCLII YVSLHSGHPF FFSSDDGDNA TPLDLHFISV AGGFRPLNHQ TRLLRLMEKV AETYKAKFVV SSSEQGEEDP FLQNATRLSS
101: SLKLPWYTRM KGSGYFREHI KMPFGGSLDV VFVDTGSLKQ EVLGGAVNAY MISQLKGLTR ILKAVDGDWR IVVGSDPLLA YTLTKEPEEP KRVARTFHQI
201: MTKYGVVRH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)