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AT1G74530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.987
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 49 Blast hits to 49 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHE3eggNOG:ENOG4111XCBEMBL:BT020390EMBL:BT020556
EMBL:CP002684EnsemblPlants:AT1G74530EnsemblPlants:AT1G74530.1entrez:843794
ExpressionAtlas:Q5M758GeneID:843794GO:GO:0016021Gramene:AT1G74530.1
hmmpanther:PTHR37204hmmpanther:PTHR37204:SF1HOGENOM:HOG000006340PhylomeDB:Q5M758
Proteomes:UP000006548RefSeq:NP_177593.2TAIR:AT1G74530TMHMM:TMhelix
UniGene:At.34873UniProt:Q5M758
Coordinates (TAIR10) chr1:-:28009866..28012044
Molecular Weight (calculated) 32125.70 Da
IEP (calculated) 8.23
GRAVY (calculated) -0.03
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSTTSAIR APNWRTAVLF WTISLTIFYS LFQMGIRNSP STSSPSSDSF VSYAEQSTRL YNKMEQDLQE NGPVFLKQGE TSQSLSLSDL FTLKDGKIAP
101: VLKVANPPVR ANVLHLSTEY SVPVLEVVKN VFSPYFENTI WFQDSKMYHF SMFHASNHIF SVPATEVEVE AEAAAVKAVA KELCPLEIIL DRVLLTSTGV
201: LLGCWKVNSG DDPITIRLKL RSVLPRAPEK QLYDAAILHT SLARLLGPPI SPTEAGSDDH LQLLHELVTR LNNQIRGFKV KLPTKAKFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)