AT4G31310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AIG2-like (avirulence induced gene) family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT2G24390.1); Has 337 Blast hits to 337 proteins in 100 species: Archae - 29; Bacteria - 60; Metazoa - 0; Fungi - 74; Plants - 104; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15191325..15192337 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20123.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||
| Length | 172 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSGKAAYDL FVYGSLQEPE VVYVLLNRVP DHVSAVLSGF HRFRLKGRVY PTILPDGTGK VNGKVLKGIT DDELKMLDEF EDVEYDRKTV EVMLTDTSEK 101: LQVETYVWKN KDDPDLYGEW DFEEWRQHDK EDFVTATKKF LENRRLPEAK TRMDTFKTFF KQDLENGKPL DS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)