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AT5G64460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:27122571 (2016): mitochondrion
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1); Has 673 Blast hits to 673 proteins in 146 species: Archae - 0; Bacteria - 69; Metazoa - 2; Fungi - 310; Plants - 162; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Protein Annotations
DNASU:836567eggNOG:COG0406eggNOG:ENOG410ISH9EMBL:AB025640
EMBL:AK317225EMBL:BT000924EMBL:CP002688EnsemblPlants:AT5G64460
EnsemblPlants:AT5G64460.1EnsemblPlants:AT5G64460.2EnsemblPlants:AT5G64460.3EnsemblPlants:AT5G64460.4
EnsemblPlants:AT5G64460.6EnsemblPlants:AT5G64460.8entrez:836567ExpressionAtlas:Q9FGF0
Gene3D:3.40.50.1240GeneID:836567Genevisible:Q9FGF0GO:GO:0005829
hmmpanther:PTHR23029hmmpanther:PTHR23029:SF40HOGENOM:HOG000006417InParanoid:Q9FGF0
InterPro:IPR013078InterPro:IPR029033KEGG:ath:AT5G64460OMA:ITEESCR
PaxDb:Q9FGF0Pfam:PF00300Pfam:Q9FGF0PhylomeDB:Q9FGF0
PRIDE:Q9FGF0PRO:PR:Q9FGF0ProteinModelPortal:Q9FGF0Proteomes:UP000006548
RefSeq:NP_001032138.1RefSeq:NP_001032139.1RefSeq:NP_001078794.1RefSeq:NP_001190613.1
RefSeq:NP_201251.1RefSeq:NP_851266.1SMART:SM00855STRING:3702.AT5G64460.1
SUPFAM:SSF53254TAIR:AT5G64460UniGene:At.22028UniProt:Q9FGF0
Coordinates (TAIR10) chr5:-:25773009..25775104
Molecular Weight (calculated) 31600.70 Da
IEP (calculated) 6.32
GRAVY (calculated) -0.30
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: METGAGIGLY PLHRCKTIYL VRHAQGIHNV DGEKNYKAYM SHDYFDAELT QLGWKQVDSL RKHVHSSGLH KKIELVISSP LMRTLQTAVG VFGGEGYTDM
101: SDVLPLMVAN AGNSSRAAIS SLNCPPVITE ESCREHLGVH PCDQRRSISD YQFLFPAVDF SLIESEEDKL WKADVRETIE ELAARGKKFL NWLWTRKEKE
201: IAIVTHSGFL FHTLNALQNE CHPDVKKEIC GHFANCELRS MVIVDRSMLG SDSSVTDYPG KIPKGIDLPS DAVVDDNNIK VE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)