AT3G23090.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : TPX2 (targeting protein for Xklp2) protein family | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8214533..8216137 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37787.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.86 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.18 | ||||||||||||||||||||||||||||
| Length | 338 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDKEPDGVVV YANGDSCNPN QENVSEPLLD SVSRDDANVH TELRYGEENI EVNEYDVKEC TSEIPVGKPI GDDFESKDVT KSSLHAKHAS KSGRGNNKTR 101: NTVPQPFSLA TEKRASSTRS FTSESLESAG LKKFPDGHSK VQSQATKVPR KPLQPKNKKL SDEEDSCSVA SYATSGAKSA KSRTVVTAAP SFRSTERAEK 201: RKEFYTKLEE KHQAMEAEKT QSEARNKEAT EAALRQLRKS LRFKANPMPK FYHEGPPPKV ELKKVTHKPL PTRAKSPKLG RRNPKEGNRA KGASRRHETR 301: KTLVISKEDH DDETTRNADQ INHKEMNRNL EPETAFAC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)