AT3G11220.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Paxneb protein-related | ||||||||
| Curator Summary (TAIR10) |
A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1–ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. | ||||||||
| Computational Description (TAIR10) |
ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3513830..3515990 | ||||||||
| Molecular Weight (calculated) | 40729.80 Da | ||||||||
| IEP (calculated) | 8.05 | ||||||||
| GRAVY (calculated) | -0.19 | ||||||||
| Length | 373 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAPNVRSSS SFSRNISVVS SPQIPGLKSG PNGTAFISSG IRDLDRILGG GYPLGSLVMV MEDPEAPHHM DLLRTYMSQG LVNNQPLLYA SPSKDPKGFL 101: GTLPHPASSK EDKPTAPDPD QGESLRIAWQ YRKYLENQKN AIDDYSNDFD MRKPLERQFL SGRPIDCVSL LDSSDLSIAQ DHCATFLSKF PSKFCSSSIL 201: FTSLLYFQAQ NSSNIASIGR IAIQSFCSPL CEYSEKESDM LSFIRLLKSM LMVSNAVAIV TFPPSLLSPS SSKRLQHMAD TLLSIKAIPD GDKELEKLLT 301: GYKDINGFLN IHKVARINTQ VPVILEAKTF SMSLKKRRFL ALECLNQAPV DGSSGTSYGT SGSCSSKSGA LDF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)