AT2G19640.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
|
||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||
| Description (TAIR10) | protein_coding : ASH1-related protein 2 | ||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||
| Computational Description (TAIR10) |
ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1728 Blast hits to 1706 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 745; Fungi - 362; Plants - 323; Viruses - 3; Other Eukaryotes - 295 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
|
||||||||||||
| Coordinates (TAIR10) | chr2:+:8491401..8492502 | ||||||||||||
| Molecular Weight (calculated) | 37534.10 Da | ||||||||||||
| IEP (calculated) | 4.67 | ||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||
| Length | 341 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MINDGGAKPE TLLRVAEIGG RGRSLVAAQS LRAGQVILRE SPLLLYSAFP FLSSSVSPYC DHCFRLLASS AHQKCQSCSL VSFCSPNCFA SHTPWLCESL 101: RRLHQSSSSA FSDQPSDRQV QARFLLSAYN LAAASPSDFQ ILLSLQGSGS SNGDPSCSAG DSAAAGFLHS LLSSVCPSLP VSISPDLTAA LLSKDKVNAF 201: GLMEPCSVSN EKRSVRAYGI YPKTSFFNHD CLPNACRFDY VDSASDGNTD IIIRMIHDVP EGREVCLSYF PVNMNYSSRQ KRLLEDYGFK CDCDRCKVEF 301: SWSEGEEDEN EIMEEMEDQD EQEEMEDSVD ICVRRRIVLA L |
||||||||||||
| See Also |
|
||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)