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AT3G03270.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.500
plasma membrane 0.500
ASURE: cytosol,plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22923678 (2012): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G53990.1); Has 554 Blast hits to 554 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 18; Fungi - 14; Plants - 512; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY66eggNOG:ENOG4111KQ7EMBL:AK317100EMBL:AY084798
EMBL:BT002765EMBL:CP002686EnsemblPlants:AT3G03270EnsemblPlants:AT3G03270.1
entrez:821303ExpressionAtlas:Q8LFK2Gene3D:3.40.50.620GeneID:821303
GO:GO:0005886GO:GO:0006950GO:GO:0016020GO:GO:0016787
Gramene:AT3G03270.1hmmpanther:PTHR31964hmmpanther:PTHR31964:SF40InterPro:IPR006016
InterPro:IPR014729KEGG:ath:AT3G03270OMA:ILRENDHPfam:PF00582
PhylomeDB:Q8LFK2Proteomes:UP000006548RefSeq:NP_566198.1STRING:3702.AT3G03270.1
SUPFAM:SSF52402TAIR:AT3G03270UniGene:At.26182UniProt:Q8LFK2
Coordinates (TAIR10) chr3:-:761383..763075
Molecular Weight (calculated) 22603.10 Da
IEP (calculated) 5.62
GRAVY (calculated) -0.28
Length 201 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)