AT2G46700.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CDPK-related kinase 3 | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CDPK-related kinase 3 (CRK3); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 97610 Blast hits to 96449 proteins in 2853 species: Archae - 105; Bacteria - 12972; Metazoa - 36079; Fungi - 11803; Plants - 17625; Viruses - 411; Other Eukaryotes - 18615 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19182968..19184892 | ||||||||||||
| Molecular Weight (calculated) | 42132.60 Da | ||||||||||||
| IEP (calculated) | 6.74 | ||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||
| Length | 371 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLCDGGELLD RILARGGKYP EDDAKAIVVQ ILTVVSFCHL QGVVHRDLKP ENFLFTSSRE DSDLKLIDFG LSDFIRPDER LNDIVGSAYY VAPEVLHRSY 101: SLEADIWSIG VITYILLCGS RPFWARTESG IFRTVLRTEP NYDDVPWPSC SSEGKDFVKR LLNKDYRKRM SAVQALTHPW LRDDSRVIPL DILIYKLVKA 201: YLHATPLRRA ALKALAKALT ENELVYLRAQ FMLLGPNKDG SVSLENFKTA LMQNATDAMR ESRVPEILHT MESLAYRKMY FEEFCAAAIS IHQLEAVDAW 301: EEIATAGFQH FETEGNRVIT IEELARELNV GASAYGHLRD WVRSSDGKLS YLGFTKFLHG VTLRAAHARP R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)