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AT4G09520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cofactor-independent phosphoglycerate mutase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT3G30841.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3635eggNOG:ENOG410IE8FEMBL:CP002687EnsemblPlants:AT4G09520
EnsemblPlants:AT4G09520.1entrez:826536Gene3D:3.40.720.10GeneID:826536
GO:GO:0005829GO:GO:0046537GO:GO:0046872Gramene:AT4G09520.1
hmmpanther:PTHR31209hmmpanther:PTHR31209:SF0InParanoid:F4JK17InterPro:IPR004456
InterPro:IPR006124InterPro:IPR017849InterPro:IPR017850KEGG:00010+5.4.2.12
KEGG:00260+5.4.2.12KEGG:00680+5.4.2.12KEGG:ath:AT4G09520OMA:EAGHMGS
PaxDb:F4JK17Pfam:PF01676Pfam:PF10143PRIDE:F4JK17
ProteinModelPortal:F4JK17Proteomes:UP000006548RefSeq:NP_192690.3SMR:F4JK17
STRING:3702.AT4G09520.1SUPFAM:SSF53649TAIR:AT4G09520UniGene:At.33689
unipathway:UPA00109UniProt:F4JK17
Coordinates (TAIR10) chr4:-:6024970..6026751
Molecular Weight (calculated) 53127.70 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.10
Length 492 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEVQKRVAF ILIDGLGDVS IPRLGYKTPL QAAEIPNLDA IASAGINGLM DPVEVGLGCG SDTAHLSLMG YDPRVYYRGR GAFESMGAGL AMSPGDIAFK
101: SNFATLDEDS GVVVSRRADR HFEEEGPILC AALDGMKLPS FPEYEVRVRY ATEHRCGVVV KGPKLSGNIS GTDPLKDNRL LLEAKPLDES EEANHTAKVV
201: NELSREISRI LVSHPVNVKR AAQGKNIANL VLLRGCGIRI EVPPFHEKHG LWPCMVAPTK IIAGLGMSLG IDILEALGAT GDYRTLLTSK AIAIANALSA
301: PLNPCPNVFE PAEDGHKPGR SDGYDFGFLH IKAIDDAGHD KATLFKVRGL EAVDKAIRQL AKLLWQAESS SNYQYFLCVT GDHSTPVEYG DHSFEPVPFT
401: MCRLKDFVRA VGGESALLET SLDPFPLPTD IASSENVIGK EEEDCGRREA SLAISGDSVS ELNEIAAARR CLGRFHGGEM MGVITKFLKL DV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)