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AT3G15890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G52540.1); Has 95455 Blast hits to 94286 proteins in 3823 species: Archae - 68; Bacteria - 10579; Metazoa - 35533; Fungi - 6381; Plants - 30035; Viruses - 237; Other Eukaryotes - 12622 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G15890-MONOMEREC:2.7.10.2eggNOG:COG0515eggNOG:KOG1187
EMBL:AB026653EMBL:AY088361EMBL:CP002686EnsemblPlants:AT3G15890
EnsemblPlants:AT3G15890.1entrez:820832GeneID:820832Genevisible:Q9LSC2
GO:GO:0004715GO:GO:0005524GO:GO:0005886Gramene:AT3G15890.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF88HOGENOM:HOG000116550InParanoid:Q9LSC2
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008266InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT3G15890ncoils:CoilOMA:DHATPHI
PaxDb:Q9LSC2Pfam:PF07714Pfam:Q9LSC2Pfscan:PS50011
PhylomeDB:Q9LSC2PRIDE:Q9LSC2PRO:PR:Q9LSC2PROSITE:PS00107
PROSITE:PS00109PROSITE:PS50011ProteinModelPortal:Q9LSC2Proteomes:UP000006548
RefSeq:NP_566530.1scanprosite:PS00107scanprosite:PS00109SMR:Q9LSC2
STRING:3702.AT3G15890.1SUPFAM:SSF56112SwissPalm:Q9LSC2TAIR:AT3G15890
UniGene:At.38974UniGene:At.66462UniProt:Q9LSC2
Coordinates (TAIR10) chr3:+:5374389..5376114
Molecular Weight (calculated) 40957.30 Da
IEP (calculated) 5.23
GRAVY (calculated) -0.55
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MQLLNSCCGK GFDGKKKEKE EPSWRVFSLK ELHAATNSFN YDNKLGEGRF GSVYWGQLWD GSQIAVKRLK EWSNREEIDF AVEVEILARI RHKNLLSVRG
101: YCAEGQERLL VYEYMQNLSL VSHLHGQHSA ECLLDWTKRM KIAISSAQAI AYLHDHATPH IVHGDVRASN VLLDSEFEAR VTDFGYGKLM PDDDTGDGAT
201: KAKSNNGYIS PECDASGKES ETSDVYSFGI LLMVLVSGKR PLERLNPTTT RCITEWVLPL VYERNFGEIV DKRLSEEHVA EKLKKVVLVG LMCAQTDPDK
301: RPTMSEVVEM LVNESKEKIS ELEANPLFKN PYSSNENNRE HVAEESSDVI LEDKDHQQQQ E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)