AT1G21980.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : phosphatidylinositol-4-phosphate 5-kinase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:+:7735053..7738309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 85949.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 752 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSDSEEDEEE EEASEVILSS VVQKKKKKNL RFGEEVERRD GLVLLAQSTP MVRSRSQGTT RRVTPTPLVD VEKPLPNGDL YIGSFSGGFP HGSGKYLWKD 101: GCMYEGDWKR GKASGKGKFS WPSGATYEGE FKSGRMEGFG TFTGADGDTY RGTWVADRKH GHGQKRYANG DFYEGTWRRN LQDGRGRYVW RNGNQYTGEW 201: RSGVISGKGL LVWPNGNRYE GLWENGIPKG NGVFTWSDGS SCVGAWNESN IMRSFFNGVE KNDLIVGNRK RSSVDSGAGS LGGEKVFPRI CIWESDGEAG 301: DITCDIIDNV EASMIYRDRI SVDRDGFRQF KKNPCWFNGE AKKPGQTISK GHKKYDLMLN LQLGIRYSVG KHASIVRDLK QTDFDPKEKF WTRFPPEGTK 401: TTPPHQSVDF RWKDYCPLVF RRLRELFQVD PAKYMLAICG NDALRELSSP GKSGSFFYLT QDDRFMIKTV KKSEVKVLLR MLPSYYKHVC QYENSLVTRF 501: YGVHCVKPVG GQKTRFIVMG NLFCSEYRIQ RRFDLKGSSH GRSTAKPEGE IDETTTLKDL DLNFSFRLQR NWYQELMKQI KRDCEFLEAE RIMDYSLLVG 601: VHFRDDNTGE KMGLSPFVLR SGRIDSYQNE KFMRGCRFLE AELQDMDRIL AGRKPSIRLG ANMPAKAERM ARRSDFDQYS SGGASYPSHG EMYEVVLYFG 701: VIDILQDYDI TKKIEHAYKS LQADPASISA VDPKLYSKRF RDFISRIFIE EG |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)