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AT1G07870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G28590.1); Has 114203 Blast hits to 112857 proteins in 4234 species: Archae - 113; Bacteria - 13468; Metazoa - 41680; Fungi - 9329; Plants - 32811; Viruses - 406; Other Eukaryotes - 16396 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07870-MONOMERBioCyc:ARA:GQT-2632-MONOMEREC:2.7.11.1eggNOG:COG0515
eggNOG:KOG1187EMBL:AC007583EMBL:AY072186EMBL:AY096744
EMBL:CP002684EnsemblPlants:AT1G07870EnsemblPlants:AT1G07870.1entrez:837302
ExpressionAtlas:Q9LQQ8Gene3D:2.60.120.200GeneID:837302Genevisible:Q9LQQ8
GO:GO:0004674GO:GO:0005524hmmpanther:PTHR27001hmmpanther:PTHR27001:SF63
HOGENOM:HOG000116550InParanoid:Q9LQQ8InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441iPTMnet:Q9LQQ8
PaxDb:Q9LQQ8Pfam:PF00069Pfam:Q9LQQ8Pfscan:PS50011
PhylomeDB:Q9LQQ8PIR:B86214PRIDE:Q9LQQ8PRO:PR:Q9LQQ8
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9LQQ8
Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_172265.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9LQQ8
STRING:3702.AT1G07870.2SUPFAM:SSF56112TAIR:AT1G07870UniGene:At.14831
UniProt:Q9LQQ8
Coordinates (TAIR10) chr1:-:2429933..2431843
Molecular Weight (calculated) 46765.70 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.50
Length 423 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFGCSKKS SKRSETNKDT VINRKIVGGT TSVAKSDKRD DQTQPSSDST KVSPYRDVNN EGGVGKEDQL SLDVKGLNLN DQVTGKKAQT FTFQELAEAT
101: GNFRSDCFLG EGGFGKVFKG TIEKLDQVVA IKQLDRNGVQ GIREFVVEVL TLSLADHPNL VKLIGFCAEG DQRLLVYEYM PQGSLEDHLH VLPSGKKPLD
201: WNTRMKIAAG AARGLEYLHD RMTPPVIYRD LKCSNILLGE DYQPKLSDFG LAKVGPSGDK THVSTRVMGT YGYCAPDYAM TGQLTFKSDI YSFGVVLLEL
301: ITGRKAIDNT KTRKDQNLVG WARPLFKDRR NFPKMVDPLL QGQYPVRGLY QALAISAMCV QEQPTMRPVV SDVVLALNFL ASSKYDPNSP SSSSGKNPSF
401: HRDRDDEEKR PHLVKETECE GSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)