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AT3G27560.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.525
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.
Computational
Description (TAIR10)
ATN1; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein serine/threonine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 126902 Blast hits to 125519 proteins in 4868 species: Archae - 154; Bacteria - 14147; Metazoa - 47911; Fungi - 11907; Plants - 32573; Viruses - 495; Other Eukaryotes - 19715 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G27560-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AB025626
EMBL:AY058062EMBL:AY090300EMBL:CP002686EnsemblPlants:AT3G27560
EnsemblPlants:AT3G27560.1entrez:822378GeneID:822378GO:GO:0004674
GO:GO:0004712GO:GO:0005524GO:GO:0005739GO:GO:0010053
Gramene:AT3G27560.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF473IntAct:Q9LT56
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT3G27560OMA:LEMIVTSPfam:PF07714
Pfscan:PS50011PhylomeDB:Q9LT56PRINTS:PR00109PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_189393.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9LT56
STRING:3702.AT3G27560.1SUPFAM:SSF56112TAIR:AT3G27560tair10-symbols:ATN1
UniGene:At.138UniProt:Q9LT56
Coordinates (TAIR10) chr3:-:10210597..10212507
Molecular Weight (calculated) 40098.50 Da
IEP (calculated) 8.13
GRAVY (calculated) -0.27
Length 356 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSASGFYSN EEFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDNR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVGF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSAEDLPGD LEMIVTSCWK EDPNERPNFT EIIQMLLRYL TTVSAPQIIP
301: PPNRRVFSSE NIVLSPESPG TCSLMSVRDG DVSRQTVNTA DSSEKQTKGS FFSCCS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)