AT2G45460.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SMAD/FHA domain-containing protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18737054..18741690 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 101562.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.61 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||||||||||||||||||
| Length | 916 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASTAAEQDE RKIVSVASNA SQDIKTAAAA SRISSQNGAS PSPSLNSKDF IVSAAANIAS QPLQNYDSNV WGVLTAISSN ARKRRQGINI LLTSDEHCLG 101: RLPCHASYQV ESNAISGNHC KVFRKPVTGG DGDDVTVFMV DTSTNGTFLN WERLTKNGPE VRVQHGDIIS LAVPPEHEKA FAFVYREVLG NNPALSCMNR 201: KRKAEDTTCE IKRQKGIGIS GPNGPISLDD FKSLQRSNTE LRKQLEAQVL TIDTLRNESR SIVEHHESDY LSISTEISLH LQEIKQIKES TAKSFHNELI 301: ELRDQLDTKQ KELAQVNKLS AEQKNSIDEL GERVSASLQT LSEANEVIQS QKASIAELKT GLDEERNQRR EERETAIAEL KAAIHRCQIE AQEELKRFSD 401: AAMRHEREQQ EVINKMKESE KEKSMQVETL MSKLEDTRQR LVCSENRNRL LEAQVSEEQL AFADAQKKLE ELDLQVKRLQ KDLDSEKQAA REEAWAKVSA 501: LELEISAAVR DLDVERQRHR GARERIMLRE TQMRAFYSTT EEISALFAKQ QEQLKTMQRT LEDEDNCDNT SLDIDLNPIN RSPNRANTQG DKRATSHLNF 601: AARASSSTSG QRSTRNEVVD TSCEDADATQ KHDCEIMSQE GQNTQEAEYP SSDKVAKGGF GSDIEGIGTA PTSGTDPVGT EQVNETQSPG NDYERNDHLR 701: KSIILAGDTM QIDCETQVHE SVQIEGAVLL LRNPNDRRDT QDIEGVGTIG TSDLLASEVA GSWANSTNPS VHGENETERS REDEESQTQK IKEVTIVQDS 801: AGQIGESQTK PTSPGVLVTN KDDAERGVIN EPVGITDQGK IKHGTRSDSE TESCSDSDDD HEKEKHNPVS DSDTEGSDMN DDKGSLSSDP DTERSHEVDG 901: DQKKQVDTMD EDDKAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)