AT2G45460.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SMAD/FHA domain-containing protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18737054..18741690 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99961.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.62 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.89 | ||||||||||||||||||||||||||||||||||||
| Length | 902 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASTAAEQDE RKIVSVASNA SQDIKTAAAA SRISSQNGAS PSPSLNSKDF IVSAAANIAS QPLQNYDSNV WGVLTAISSN ARKRRQGINI LLTSDEHCLG 101: RLPCHASYQV ESNAISGNHC KVFRKPVTGG DGDDVTVFMV DTSTNGTFLN WERLTKNGPE VRVQHGDIIS LAVPPEHEKA FAFVYREVLG NNPALSCMNR 201: KRKAEDTTCE IKRQKGIGIS GPNGPISLDD FKSLQRSNTE LRKQLEAQVL TIDTLRNESR SIVEHHESEI KQIKESTAKS FHNELIELRD QLDTKQKELA 301: QVNKLSAEQK NSIDELGERV SASLQTLSEA NEVIQSQKAS IAELKTGLDE ERNQRREERE TAIAELKAAI HRCQIEAQEE LKRFSDAAMR HEREQQEVIN 401: KMKESEKEKS MQVETLMSKL EDTRQRLVCS ENRNRLLEAQ VSEEQLAFAD AQKKLEELDL QVKRLQKDLD SEKQAAREEA WAKVSALELE ISAAVRDLDV 501: ERQRHRGARE RIMLRETQMR AFYSTTEEIS ALFAKQQEQL KTMQRTLEDE DNCDNTSLDI DLNPINRSPN RANTQGDKRA TSHLNFAARA SSSTSGQRST 601: RNEVVDTSCE DADATQKHDC EIMSQEGQNT QEAEYPSSDK VAKGGFGSDI EGIGTAPTSG TDPVGTEQVN ETQSPGNDYE RNDHLRKSII LAGDTMQIDC 701: ETQVHESVQI EGAVLLLRNP NDRRDTQDIE GVGTIGTSDL LASEVAGSWA NSTNPSVHGE NETERSREDE ESQTQKIKEV TIVQDSAGQI GESQTKPTSP 801: GVLVTNKDDA ERGVINEPVG ITDQGKIKHG TRSDSETESC SDSDDDHEKE KHNPVSDSDT EGSDMNDDKG SLSSDPDTER SHEVDGDQKK QVDTMDEDDK 901: AT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)