AT1G66160.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.850 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CYS, MET, PRO, and GLY protein 1 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CYS, MET, PRO, and GLY protein 1 (CMPG1); FUNCTIONS IN: binding; INVOLVED IN: response to chitin; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 1454 Blast hits to 1441 proteins in 68 species: Archae - 0; Bacteria - 10; Metazoa - 52; Fungi - 8; Plants - 1378; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24637218..24638513 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46412.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.43 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||
| Length | 415 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLSLRVRRR GGSVSKKEII PVTSCSEEVE ITIPSQFQCP ISYELMKDPW FESGYQTCPV TNTVLTSLEQ IPNHTIRRMI QGWCGSSLGG GIERIPTPRV 101: PVTSHQVSEI CERLSAATRR GDYAACMEMV TKMTRLGKES ERNRKCVKEN GAGLVLCVCF DAFSENANAS LLLEETVSVL TWMLPIGLEG QSKLTTTSSF 201: NRLVELLRNG DQNAAFLIKE LLELNVTHVH ALTKINGVQE AFMKSINRDS TCVNSLISIH HMILTNQETV SRFLELDLVN ITVEMLVDSE NSVCEKALTV 301: LNVICETKEG REKVRRNKLV IPILVKKILK ISEKKDLVSV MWKVCKSGDG SEVEEALRLG AFKKLVVMLQ VGCGEGTKEK VTELLKMMNK VMKMNGFVDR 401: SYSSSIEFKH VKKPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)