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AT1G32380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : phosphoribosyl pyrophosphate (PRPP) synthase 2
Curator
Summary (TAIR10)
Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.
Computational
Description (TAIR10)
phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G32380-MONOMERBioGrid:25365EC:2.7.6.1eggNOG:COG0462eggNOG:KOG1448EMBL:AC007767EMBL:AF439851
EMBL:AY125555EMBL:CP002684EMBL:X92974EnsemblPlants:AT1G32380EnsemblPlants:AT1G32380.1entrez:840131Gene3D:3.40.50.2020
GeneID:840131Genevisible:Q42583GO:GO:0000287GO:GO:0004749GO:GO:0005524GO:GO:0009156GO:GO:0009165
GO:GO:0009507GO:GO:0016301Gramene:AT1G32380.1gramene_pathway:2.7.6.1gramene_pathway:PWY0-662HAMAP:MF_00583_Bhmmpanther:PTHR10210
hmmpanther:PTHR10210:SF54HOGENOM:HOG000210449InParanoid:Q42583IntAct:Q42583InterPro:IPR000842InterPro:IPR005946InterPro:IPR029057
InterPro:IPR029099iPTMnet:Q42583KEGG:00030+2.7.6.1KEGG:00230+2.7.6.1KEGG:ath:AT1G32380KO:K00948OMA:TARLMFD
PaxDb:Q42583Pfam:PF13793Pfam:PF14572Pfam:Q42583PhylomeDB:Q42583PIR:G86448PIR:S71262
PRIDE:Q42583PRO:PR:Q42583PROSITE:PS00114ProteinModelPortal:Q42583Proteomes:UP000006548Reactome:R-ATH-73843RefSeq:NP_174516.1
scanprosite:PS00114SMR:Q42583STRING:3702.AT1G32380.1SUPFAM:SSF53271TAIR:AT1G32380tair10-symbols:PRS2TIGRfam:TIGR01251
TIGRFAMs:TIGR01251UniGene:At.423unipathway:UPA00087UniProt:Q42583
Coordinates (TAIR10) chr1:+:11682033..11684229
Molecular Weight (calculated) 43335.30 Da
IEP (calculated) 8.31
GRAVY (calculated) 0.08
Length 400 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)