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AT5G06670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G12020.1); Has 49021 Blast hits to 33870 proteins in 1834 species: Archae - 494; Bacteria - 4897; Metazoa - 23456; Fungi - 4567; Plants - 3807; Viruses - 58; Other Eukaryotes - 11742 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0242EMBL:CP002688EnsemblPlants:AT5G06670EnsemblPlants:AT5G06670.1entrez:830555Gene3D:3.40.850.10
GeneID:830555GO:GO:0003777GO:GO:0005524GO:GO:0005874GO:GO:0007018Gramene:AT5G06670.1hmmpanther:PTHR24115
hmmpanther:PTHR24115:SF70InParanoid:F4K3X8InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640iPTMnet:F4K3X8
KEGG:ath:AT5G06670KO:K11498ncoils:CoilOMA:EEHRHIGPANTHER:PTHR24115PaxDb:F4K3X8Pfam:PF00225
Pfscan:PS50067PRIDE:F4K3X8PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067ProteinModelPortal:F4K3X8Proteomes:UP000006548
RefSeq:NP_196285.5scanprosite:PS00411SMART:SM00129SMR:F4K3X8STRING:3702.AT5G06670.1SUPFAM:SSF52540TAIR:AT5G06670
UniGene:At.54750UniProt:F4K3X8
Coordinates (TAIR10) chr5:-:2048243..2055019
Molecular Weight (calculated) 110043.00 Da
IEP (calculated) 5.85
GRAVY (calculated) -0.63
Length 986 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSKQVSKTR NGGFSKLKTV ESSASSTTSS SKLYQEASVD SHSSPTSSSV RSKPQLPPKP LQSKENVTVT VRFRPLSPRE IRKGEEIAWY ADGETIVRNE
101: NNQSIAYAYD RVFGPTTTTR NVYDVAAQHV VNGAMAGVNV TLSVNSTTGT IFAYGVTSSG KTHTMHGNQR SPGIIPLAVK DAFSIIQETP RREFLLRVSY
201: FEIYNEVVND LLNPAGQNLR IREDEQGTYI EGIKEEVVLS PAHVLSLIAA GEEHRHIGST SFNLLSSRSH TMFTLTIESS PLGDNNEGGA VHLSQLNLID
301: LAGSESSKAE TSGLRRKEGS YINKSLLTLG TVISKLTDRR ASHVPYRDSK LTRLLESSLS GHGRVSLICT VTPASSNSEE THNTLKFAHR AKHIEIQAAQ
401: NKIIDEKSLI KKYQYEIRQL KEELEQLKQG IKPVSQLKDI SGDDIDIVLL KQKLEEEEDA KAALLSRIQR LTKLILVSNK TPQTSRFSYR ADPRRRHSFG
501: EEELAYLPHK RRDLTDDENL ELYVSREGTP EIIDDAFIEE KKTRKHGLLN WLKIKKKDSS LGGSSLSDKS SAVKSNSTPS TPQGEGSDFH TESRLSEGSA
601: LADQIIETME NREAHEDSFH EIETPETRIK MIDQMEILRE QQKTLSEEMA QQSRSFKLLS EEAAKAPQNE EIKAEIINLN GDIKAKNDQI ATLGKQILDF
701: VIASHDELDK SDIVQAVSEM RAQLNEKCFE LEVKAADNRI IQEQLTEKTS FCEDLQEEVA NLKQQLSDAL ELGDINSVTC HMQQSSQSPN KNEEKVIEAQ
801: AFEIEELKLK AAELSELNEQ LEIRNKKLAE ESSYAKELAS AAAIELKALS EEIARLMNHN ERLAADLAAV QKSSVTTPQG KTGNLRNGRR ESVSKRKEQE
901: NSLMELKREL TVSKEREVSF EAALIEKIQR EAELQRTVEE SKQREAYLEN ELANMWGLVA KLRSQGAANS GLSDSVSETR IEHFGT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)