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AT5G45020.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutathione S-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutathione S-transferase family protein; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 2476 Blast hits to 2476 proteins in 820 species: Archae - 30; Bacteria - 1549; Metazoa - 24; Fungi - 237; Plants - 128; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G45020-MONOMERBioCyc:ARA:GQT-1211-MONOMERDNASU:834533eggNOG:COG0435
eggNOG:KOG2903EMBL:AB010693EMBL:AF375406EMBL:BT000547
EMBL:CP002688EnsemblPlants:AT5G45020EnsemblPlants:AT5G45020.1EnsemblPlants:AT5G45020.2
entrez:834533Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:834533
GO:GO:0016740Gramene:AT5G45020.1Gramene:AT5G45020.2hmmpanther:PTHR32419
hmmpanther:PTHR32419:SF6HOGENOM:HOG000245143InterPro:IPR004045InterPro:IPR010987
InterPro:IPR012336InterPro:IPR016639KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18
KEGG:00982+2.5.1.18KEGG:ath:AT5G45020KO:K07393OMA:DYLNGAK
PANTHER:PTHR32419Pfam:PF13409Pfam:PF13410Pfscan:PS50405
PhylomeDB:Q9FL95PIRSF:PIRSF015753PROSITE:PS50405Proteomes:UP000006548
RefSeq:NP_001190472.1RefSeq:NP_199315.1SMR:Q9FL95STRING:3702.AT5G45020.1
SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT5G45020UniGene:At.28738
UniProt:Q9FL95
Coordinates (TAIR10) chr5:+:18169206..18170488
Molecular Weight (calculated) 37344.70 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.53
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MARSGVDETS ESGAFVRTAS TFRNFVSQDP DSQFPAESGR YHLYISYACP WACRCLSYLK IKGLDEAITF SSVHAIWGRT KETDDHRGWV FPDSDTELPG
101: AEPDYLNGAK SVRELYEIAS PNYEGKYTVP VLWDKKLKTV VNNESSEIIR MFNTEFNGIA KTPSLDLYPS HLRDVINETN GWVFNGINNG VYKCGFARKQ
201: EPYNEAVNQL YEAVDRCEEV LGKQRYICGN TFTEADIRLF VTLIRFDEVY AVHFKCNKRL LREYPNIFNY IKDIYQIHGM SSTVNMEHIK QHYYGSHPTI
301: NPFGIIPHGP NIDYSSPHDR DRFSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)