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AT3G62720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21143678 (2010): Golgi Golgi apparatus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : xylosyltransferase 1
Curator
Summary (TAIR10)
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational
Description (TAIR10)
xylosyltransferase 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: UDP-xylosyltransferase 2 (TAIR:AT4G02500.1); Has 441 Blast hits to 440 proteins in 92 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 134; Plants - 286; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G62720-MONOMERBioCyc:ARA:GQT-1697-MONOMERBioCyc:MetaCyc:AT3G62720-MONOMERBioGrid:10760BRENDA:2.4.2.39CAZy:GT34EC:2.4.2.39
eggNOG:ENOG410XSJSeggNOG:KOG4748EMBL:AF424587EMBL:AK317529EMBL:AL162651EMBL:BT002298EMBL:CP002686
EMBL:KJ138777EnsemblPlants:AT3G62720EnsemblPlants:AT3G62720.1EnsemblPlants:AT3G62720.2entrez:825446ExpressionAtlas:Q9LZJ3GeneID:825446
Genevisible:Q9LZJ3GO:GO:0000139GO:GO:0000271GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0006486
GO:GO:0010411GO:GO:0016021GO:GO:0033843GO:GO:0035252Gramene:AT3G62720.1Gramene:AT3G62720.2gramene_pathway:2.7.7.-
gramene_pathway:PWY-5936hmmpanther:PTHR31311hmmpanther:PTHR31311:SF6HOGENOM:HOG000239436InParanoid:Q9LZJ3InterPro:IPR008630KEGG:ath:AT3G62720
KO:K08238OMA:EIREHFFPaxDb:Q9LZJ3Pfam:PF05637Pfam:Q9LZJ3PhylomeDB:Q9LZJ3PIR:T48061
PRIDE:Q9LZJ3PRO:PR:Q9LZJ3ProteinModelPortal:Q9LZJ3Proteomes:UP000006548RefSeq:NP_001030917.1RefSeq:NP_191831.1SMR:Q9LZJ3
STRING:3702.AT3G62720.1TAIR:AT3G62720tair10-symbols:ATXT1tair10-symbols:XT1tair10-symbols:XXT1TMHMM:TMhelixUniGene:At.4829
UniPathway:UPA00378UniProt:B9DHH6UniProt:Q9LZJ3
Coordinates (TAIR10) chr3:+:23201326..23202708
Molecular Weight (calculated) 53385.00 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.56
Length 460 amino acids
Sequence (TAIR10)
(BLAST)
001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)