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AT1G70090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.991
What is SUBAcon?
Predictors External Curations
SwissProt : golgi 16381842
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glucosyl transferase family 8
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 2070 Blast hits to 2058 proteins in 476 species: Archae - 0; Bacteria - 1035; Metazoa - 229; Fungi - 4; Plants - 727; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410IJGEeggNOG:ENOG410ZJKSEMBL:KJ138945
EnsemblPlants:AT1G70090EnsemblPlants:AT1G70090.1EnsemblPlants:AT1G70090.2entrez:843345
ExpressionAtlas:W8Q3M8Gene3D:3.90.550.10GeneID:843345GO:GO:0016757
Gramene:AT1G70090.1Gramene:AT1G70090.2hmmpanther:PTHR13778hmmpanther:PTHR13778:SF7
InterPro:IPR002495InterPro:IPR029044KEGG:ath:AT1G70090OMA:ETWMQIQ
PaxDb:W8Q3M8Pfam:O04536Pfam:PF01501PhylomeDB:W8Q3M8
ProteinModelPortal:W8Q3M8RefSeq:NP_001117576.1RefSeq:NP_564983.1SMR:W8Q3M8
STRING:3702.AT1G70090.1SUPFAM:SSF53448tair10-symbols:GATL9tair10-symbols:LGT8
TMHMM:TMhelixUniGene:At.20996UniGene:At.74177UniProt:O04536
UniProt:W8Q3M8
Coordinates (TAIR10) chr1:+:26400927..26402099
Molecular Weight (calculated) 44261.10 Da
IEP (calculated) 7.54
GRAVY (calculated) -0.09
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MRLRFPMKSA VLAFAIFLVF IPLFSVGIRM IPGRLTAVSA TVGNGFDLGS FVEAPEYRNG KECVSQSLNR ENFVSSCDAS LVHVAMTLDS EYLRGSIAAV
101: HSMLRHASCP ENVFFHLIAA EFDPASPRVL SQLVRSTFPS LNFKVYIFRE DTVINLISSS IRQALENPLN YARNYLGDIL DPCVDRVIYL DSDIIVVDDI
201: TKLWNTSLTG SRIIGAPEYC HANFTKYFTS GFWSDPALPG FFSGRKPCYF NTGVMVMDLV RWREGNYREK LETWMQIQKK KRIYDLGSLP PFLLVFAGNV
301: EAIDHRWNQH GLGGDNVRGS CRSLHKGPVS LLHWSGKGKP WVRLDEKRPC PLDHLWEPYD LYEHKIERAK DQSLFGFSSL SELTEDSSFF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)