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AT4G02500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : UDP-xylosyltransferase 2
Curator
Summary (TAIR10)
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational
Description (TAIR10)
UDP-xylosyltransferase 2 (XT2); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xylosyltransferase 1 (TAIR:AT3G62720.2); Has 461 Blast hits to 460 proteins in 94 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 152; Plants - 284; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G02500-MONOMERBioCyc:MetaCyc:AT4G02500-MONOMERBioGrid:13231BRENDA:2.4.2.39
CAZy:GT34EC:2.4.-.-EC:2.4.2.39eggNOG:ENOG410XSJS
eggNOG:KOG4748EMBL:AC002330EMBL:AF069298EMBL:AJ245571
EMBL:AL161494EMBL:AY057598EMBL:AY140029EMBL:BT006601
EMBL:CP002687EMBL:KJ138768EnsemblPlants:AT4G02500EnsemblPlants:AT4G02500.1
entrez:827940GeneID:827940Genevisible:O22775GO:GO:0000139
GO:GO:0000271GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0006486GO:GO:0010411GO:GO:0016021GO:GO:0033843
GO:GO:0035252Gramene:AT4G02500.1gramene_pathway:2.7.7.-gramene_pathway:PWY-5936
hmmpanther:PTHR31311hmmpanther:PTHR31311:SF6HOGENOM:HOG000239436InParanoid:O22775
InterPro:IPR008630KEGG:ath:AT4G02500KO:K08238OMA:PLEVKDD
PaxDb:O22775Pfam:O22775Pfam:PF05637PhylomeDB:O22775
PIR:H85031PIR:T01300PRIDE:O22775PRO:PR:O22775
ProteinModelPortal:O22775Proteomes:UP000006548RefSeq:NP_567241.1SMR:O22775
STRING:3702.AT4G02500.1TAIR:AT4G02500tair10-symbols:ATXT2tair10-symbols:XT2
tair10-symbols:XXT2TMHMM:TMhelixUniGene:At.21214UniGene:At.67608
UniProt:O22775
Coordinates (TAIR10) chr4:+:1101638..1103345
Molecular Weight (calculated) 53097.60 Da
IEP (calculated) 6.98
GRAVY (calculated) -0.51
Length 461 amino acids
Sequence (TAIR10)
(BLAST)
001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)