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AT3G25140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
golgi 0.500
mitochondrion 0.500
ASURE: golgi,mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): Golgi
  • PMID:15295017 (2004): Golgi
  • PMID:15276431 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotide-diphospho-sugar transferases superfamily protein
Curator
Summary (TAIR10)
Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.
Computational
Description (TAIR10)
QUASIMODO 1 (QUA1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, pectin biosynthetic process, homogalacturonan biosynthetic process; LOCATED IN: mitochondrion, Golgi apparatus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 9 (TAIR:AT3G02350.1); Has 1333 Blast hits to 1331 proteins in 208 species: Archae - 0; Bacteria - 350; Metazoa - 145; Fungi - 2; Plants - 818; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410IEJ5eggNOG:ENOG410YC9ZEMBL:KJ138811
EnsemblPlants:AT3G25140EnsemblPlants:AT3G25140.1entrez:822105ExpressionAtlas:W8PVC6
Gene3D:3.90.550.10GeneID:822105GO:GO:0000139GO:GO:0005739
GO:GO:0016021GO:GO:0045489GO:GO:0047262GO:GO:0071555
Gramene:AT3G25140.1gramene_pathway:2.4.1.43gramene_pathway:PWY-1061hmmpanther:PTHR32116
hmmpanther:PTHR32116:SF19InterPro:IPR002495InterPro:IPR029044InterPro:IPR029993
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-
KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-
KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-
KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-
KEGG:00965+2.4.1.-KEGG:ath:AT3G25140KO:K13648ncoils:Coil
OMA:YDLEFVQPANTHER:PTHR32116PaxDb:W8PVC6Pfam:PF01501
Pfam:Q9LSG3PhylomeDB:W8PVC6ProteinModelPortal:W8PVC6RefSeq:NP_189150.1
STRING:3702.AT3G25140.1SUPFAM:SSF53448tair10-symbols:GAUT8tair10-symbols:QUA1
TMHMM:TMhelixUniGene:At.19709UniPathway:UPA00845UniProt:Q9LSG3
UniProt:W8PVC6
Coordinates (TAIR10) chr3:+:9154748..9156642
Molecular Weight (calculated) 64371.40 Da
IEP (calculated) 9.12
GRAVY (calculated) -0.37
Length 559 amino acids
Sequence (TAIR10)
(BLAST)
001: MANHHRLLRG GGSPAIIGGR ITLTAFASTI ALFLFTLSFF FASDSNDSPD LLLPGVEYSN GVGSRRSMLD IKSDPLKPRL IQIRKQADDH RSLALAYASY
101: ARKLKLENSK LVRIFADLSR NYTDLINKPT YRALYDSDGA SIEESVLRQF EKEVKERIKM TRQVIAEAKE SFDNQLKIQK LKDTIFAVNE QLTNAKKQGA
201: FSSLIAAKSI PKGLHCLAMR LMEERIAHPE KYTDEGKDRP RELEDPNLYH YAIFSDNVIA ASVVVNSAVK NAKEPWKHVF HVVTDKMNLG AMQVMFKLKE
301: YKGAHVEVKA VEDYTFLNSS YVPVLKQLES ANLQKFYFEN KLENATKDTT NMKFRNPKYL SILNHLRFYL PEMYPKLHRI LFLDDDVVVQ KDLTGLWEID
401: MDGKVNGAVE TCFGSFHRYA QYMNFSHPLI KEKFNPKACA WAYGMNFFDL DAWRREKCTE EYHYWQNLNE NRALWKLGTL PPGLITFYST TKPLDKSWHV
501: LGLGYNPSIS MDEIRNAAVV HFNGNMKPWL DIAMNQFRPL WTKHVDYDLE FVQACNFGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)