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AT3G23300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:23990937 (2013): plasma membrane
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): Golgi
  • PMID:14617066 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
BioGrid:7242EC:2.1.1.-eggNOG:ENOG410IGJAeggNOG:ENOG410YDXK
EMBL:AB015474EMBL:AY035138EMBL:BT000890EMBL:CP002686
EnsemblPlants:AT3G23300EnsemblPlants:AT3G23300.1entrez:821910Gene3D:3.40.50.150
GeneID:821910Genevisible:Q8H118GO:GO:0000139GO:GO:0005634
GO:GO:0005768GO:GO:0005774GO:GO:0005794GO:GO:0005802
GO:GO:0008168GO:GO:0016021Gramene:AT3G23300.1hmmpanther:PTHR10108
hmmpanther:PTHR10108:SF906HOGENOM:HOG000238541InParanoid:Q8H118InterPro:IPR004159
InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-
KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-
KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT3G23300
OMA:MEACITQPaxDb:Q8H118Pfam:PF03141Pfam:Q8H118
PhylomeDB:Q8H118PRIDE:Q8H118PRO:PR:Q8H118ProteinModelPortal:Q8H118
Proteomes:UP000006548RefSeq:NP_566725.2STRING:3702.AT3G23300.1SUPFAM:SSF53335
TAIR:AT3G23300TMHMM:TMhelixUniGene:At.23224UniProt:Q8H118
Coordinates (TAIR10) chr3:+:8333521..8335902
Molecular Weight (calculated) 69360.00 Da
IEP (calculated) 6.71
GRAVY (calculated) -0.38
Length 611 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGRSEGGKK KPVIVLLCVA SVVLVFVYLF FGSSNHKAIE YGRKLGLGGD DDDSTKKDDT SSSFYVEDVV GNGFTPRSFP VCDDRHSELI PCLDRNLIYQ
101: MRLKLDLSLM EHYERHCPPP ERRFNCLIPP PPGYKIPIKW PKSRDEVWKV NIPHTHLAHE KSDQNWMVVK GEKINFPGGG THFHYGADKY IASMANMLNF
201: PNNVLNNGGR LRTFLDVGCG VASFGGYLLA SEIMTMSLAP NDVHQNQIQF ALERGIPAYL GVLGTKRLPY PSRSFELAHC SRCRIDWLQR DGILLLELDR
301: VLRPGGYFAY SSPEAYAQDE EDLRIWREMS ALVGRMCWTI AAKRNQTVIW QKPLTNDCYL GREPGTQPPL CNSDSDPDAV YGVNMEACIT QYSDHDHKTK
401: GSGLAPWPAR LTSPPPRLAD FGYSTDIFEK DTETWRQRVD TYWDLLSPKI QSDTVRNIMD MKASMGSFAA ALKEKDVWVM NVVPEDGPNT LKLIYDRGLM
501: GAVHSWCEAF STYPRTYDLL HAWDIISDIK KRGCSAEDLL LEMDRILRPS GFILIRDKQS VVDLVKKYLK ALHWEAVETK TASESDQDSD NVILIVQKKL
601: WLTSESLRDL E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)