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AT3G61760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24872594 (2014): plastid
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DYNAMIN-like 1B
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DYNAMIN-like 1B (DL1B); FUNCTIONS IN: GTP binding, GTPase activity; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin-like protein (TAIR:AT5G42080.1); Has 2850 Blast hits to 2733 proteins in 320 species: Archae - 2; Bacteria - 48; Metazoa - 1057; Fungi - 814; Plants - 580; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G61760-MONOMERBioGrid:10663eggNOG:COG0699eggNOG:KOG0446EMBL:AL132959EMBL:AY189279EMBL:CP002686
EnsemblPlants:AT3G61760EnsemblPlants:AT3G61760.1entrez:825349Gene3D:3.40.50.300GeneID:825349Genevisible:Q84XF3GO:GO:0003924
GO:GO:0005525GO:GO:0005737GO:GO:0005874Gramene:AT3G61760.1hmmpanther:PTHR11566hmmpanther:PTHR11566:SF60HOGENOM:HOG000161068
InParanoid:Q84XF3IntAct:Q84XF3InterPro:IPR000375InterPro:IPR001401InterPro:IPR003130InterPro:IPR019762InterPro:IPR020850
InterPro:IPR022812InterPro:IPR027417InterPro:IPR030381KEGG:ath:AT3G61760OMA:KEYAEFMPANTHER:PTHR11566PaxDb:Q84XF3
Pfam:PF00350Pfam:PF01031Pfam:PF02212Pfam:Q84XF3Pfscan:PS51388Pfscan:PS51718PhylomeDB:Q84XF3
PIR:T47968PRIDE:Q84XF3PRINTS:PR00195PRO:PR:Q84XF3PROSITE:PS00410PROSITE:PS51388PROSITE:PS51718
ProteinModelPortal:Q84XF3Proteomes:UP000006548RefSeq:NP_191735.2scanprosite:PS00410SMART:SM00053SMART:SM00302SMR:Q84XF3
STRING:3702.AT3G61760.1SUPFAM:SSF52540TAIR:AT3G61760tair10-symbols:ADL1Btair10-symbols:DL1BUniGene:At.34232UniProt:Q84XF3
Coordinates (TAIR10) chr3:-:22860546..22864092
Molecular Weight (calculated) 68088.00 Da
IEP (calculated) 7.89
GRAVY (calculated) -0.29
Length 610 amino acids
Sequence (TAIR10)
(BLAST)
001: MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSELKQY PTLRVEVSGA AVDSLDRMRD ESRKATLLLV DMESGYLTVE FFRKLPQDSE
501: KGGNPTHSIF DRYNDAYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDIF FTELGQKEMS KLSKLLDEDP AVQQRRTSIA KRLELYRSAQ
601: TDIEAVAWSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)