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AT5G16510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.500
extracellular 0.500
ASURE: cytosol,extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:18998720 (2009): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Alpha-1,4-glucan-protein synthase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, cell junction, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16510-MONOMERBioCyc:ARA:GQT-628-MONOMERBioGrid:16789CAZy:GT75
DNASU:831513EC:5.4.99.30eggNOG:ENOG410IHBFeggNOG:ENOG410YC4P
EMBL:AB005242EMBL:AY088511EMBL:AY091141EMBL:AY114087
EMBL:CP002688EnsemblPlants:AT5G16510EnsemblPlants:AT5G16510.1EnsemblPlants:AT5G16510.2
entrez:831513ExpressionAtlas:Q9FFD2GeneID:831513Genevisible:Q9FFD2
GO:GO:0005794GO:GO:0005829GO:GO:0009506GO:GO:0009651
GO:GO:0009832GO:GO:0016866GO:GO:0030244GO:GO:0033356
GO:GO:0071555Gramene:AT5G16510.1Gramene:AT5G16510.2hmmpanther:PTHR31682
hmmpanther:PTHR31682:SF4HOGENOM:HOG000234443InParanoid:Q9FFD2IntAct:Q9FFD2
InterPro:IPR004901iPTMnet:Q9FFD2KEGG:ath:AT5G16510KO:K13379
OMA:RFHIIVVPaxDb:Q9FFD2Pfam:PF03214Pfam:Q9FFD2
PhylomeDB:Q9FFD2PIRSF:PIRSF016429PRIDE:Q9FFD2PRO:PR:Q9FFD2
Proteomes:UP000006548RefSeq:NP_197155.1RefSeq:NP_850831.1STRING:3702.AT5G16510.1
TAIR:AT5G16510UniGene:At.6462UniProt:Q9FFD2UniProt:W8Q2T5
Coordinates (TAIR10) chr5:+:5393296..5394342
Molecular Weight (calculated) 38587.30 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.05
Length 348 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)