AT3G49370.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Calcium-dependent protein kinase (CDPK) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 120826 Blast hits to 119042 proteins in 3470 species: Archae - 178; Bacteria - 14958; Metazoa - 45068; Fungi - 12844; Plants - 26097; Viruses - 535; Other Eukaryotes - 21146 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:18304954..18307906 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 66375.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.35 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 594 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGHCYSRNIS TVDDDDEIPS ATAQLPHRSH QNHHQTSSSS SIPQSPATSE VNPYNISPFQ SPLPAGVAPS PARTPGRKFK WPFPPPSPAK PIMAALRRRR 101: GTAPHPRDGP IPEDSEAGGS GGGIGERLDK NFGFAKNFEG KYELGREVGR GHFGHTCWAK AKKGKIKGQT VAVKIISKSK MTSALSIEDV RREVKLLKAL 201: SGHSHMVKFY DVFEDSDNVF VVMELCEGGE LLDSILARGG RYPEAEAKRI LVQILSATAF FHLQGVVHRD LKPENFLFTS KNEDAVLKVI DFGLSDYARF 301: DQRLNDVVGS AYYVAPEVLH RSYSTEADIW SIGVISYILL CGSRPFYGRT ESAIFRCVLR ANPNFDDLPW PSISPIAKDF VKRLLNKDHR KRMTAAQALA 401: HPWLRDENPG LLLDFSIYKL VKSYIRASPF RRAALKSLSK AIPEEELVFL KAQFMLLEPE DGGLHLHNFT TALTRYATDA MIESRLPDIL NMMQPLAHKK 501: LDFEEFCAAS VSVYQLEALE EWEQIATVAF EHFESEGSRA ISVQELAEEM SLGPNAYPLL KDWIRSLDGK LNFLGYAKFL HGVTVRSSSS RPMR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)