AT2G28940.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G39110.1); Has 109107 Blast hits to 107943 proteins in 3092 species: Archae - 87; Bacteria - 12159; Metazoa - 40133; Fungi - 8935; Plants - 31872; Viruses - 346; Other Eukaryotes - 15575 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:12426853..12428314 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39124.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.01 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||
| Length | 343 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFQTLMVLIR RLMLLLNSLI VKVYSVQGHK EWINEVNFLG VVNHPNLVKL VGYCADDDER GMQRLLVYEL MCNKSLEDHL VGRVVSVSLP WMMRLKIAQD 101: AAQGLAYLHE EMDFQLIFRD FKSSNILLDE RFGAKLSDFG LARQGPPEGL GHVSTSVVGT VGYAAPEYVQ TGKLTAKSDV WSFGVVLYEL ITGRRAVDRN 201: RPRGEQKLLE WVKPYVSDSK KFHLIVDPRL EGQYYCMKSV QRVAALANKC LMKQPKSRPK MSEVVSLLGR IIDEEAENVP PPVADETEEI IKAELNGESE 301: PELKKQGSSY RKKVLDLRDK MNLNKSLSKL DWRNWTPGLV RTW |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)